Using gap‐crossing capacity to evaluate functional connectivity of two Atlantic rainforest birds and their response to fragmentation

Abstract One of the main consequences of habitat loss and fragmentation is the increase in patch isolation and the consequent decrease in landscape connectivity. In this context, species persistence depends on their responses to this new landscape configuration, particularly on their capacity to move through the interhabitat matrix. Here, we aimed first to determine gap‐crossing probabilities related to different gap widths for two forest birds (Thamnophilus caerulescens, Thamnophilidae; and Basileuterus culicivorus, Parulidae) from the Brazilian Atlantic rainforest. These values were defined with a playback technique and then used in analyses based on graph theory to determine functional connections among forest patches. Both species were capable of crossing forest gaps between patches, and these movements were related to gap width. The probability of crossing 40 m gaps was 50% for both species. This probability falls to 10% when the gaps are 60 m (for B. culicivorus) or 80 m (for T. caerulescens). Actually, birds responded to stimulation about two times more distant inside forest trials (control) than in gap‐crossing trials. Models that included gap‐crossing capacity improved the explanatory power of species abundance variation in comparison to strictly structural models based merely on patch area and distance measurements. These results highlighted that even very simple functional connectivity measurements related to gap‐crossing capacity can improve the understanding of the effect of habitat fragmentation on bird occurrence and abundance.     

Sequence Diversity and Linkage Disequilibrium within the Merozoite Surface Protein-1 (Msp-1) Locus of Plasmodium falciparum: A Longitudinal Study in Brazil

ABSTRACT. The merozoite surface protein‐1 (MSP‐1) is a major vaccine candidate for the asexual blood stage of malaria. We examined both the extent of sequence diversity in block 17, the 3′end of Msp‐1 gene coding for a 19‐kDa polypeptide (MSP‐1₁₉) putatively involved in red blood cell binding, and the patterns of linkage disequilibrium between polymorphic sites throughout the Msp‐1 locus. The parasite population sample consisted of Plasmodium falciparum isolates collected between 1985 and 1998 in Rondônia. an area of hypoendemic malaria transmission in the southwestern Brazilian Amazon. Results were summarized as follows. (I) Seven block‐17 sequence variants or haplotypes were found among 130 isolates, including two new haplotypes (novel combinations of previously reported amino acid replacements), here named Brazil‐1 (E‐TSR‐F) and Brazil‐2 (Q‐TSR‐F). (2) As previously shown for other Msp‐1 polymorphisms, frequencies of block‐17 haplotypes displayed significant temporal variation. (3) Extensive linkage disequilibrium was demonstrated between neighboring dimorphic sites within block 17, as well as between polymorphisms at the 5′and 3′ends of Msp‐1 (map distance range: 3.83–4.99 kb). (4) The overall patterns of linkage disequilibrium within Msp‐1 remained stable over a period of nearly one decade, and examples of possible ‘epidemic’ expansion of parasites carrying particular Msp‐1 alleles were found in the 1980s and 1990s. These results are discussed in relation to the population biology of P. falciparum and the development of malaria vaccines based on MSP‐1.     

The evolution of placentas and superfetation in the fish genus Poecilia (Cyprinodontiformes: Poeciliidae: subgenera Micropoecilia and Acanthophacelus)

Complex adaptations are often found in nature, although our ability to discern how and why such traits evolved is limited because their origin occurred in the distant past and the details of their evolution have been lost through extinction (e.g. all placental mammals inherited their placentas from a single common ancestor that lived over 100 Mya). In poeciliid fishes, placentas have evolved independently multiple times and portions of the path to the evolution of complexity can be found in living species. In the present study, we describe the life histories of six species within the genus Poecilia that includes the subgenera Micropoecilia and Acanthophacelus (the guppy; Poecilia reticulata). We demonstrate that extensive placentotrophy and superfetation, the ability to simultaneously carry more than one developing brood, have evolved within this clade. These fish represent the third clade in which we have discovered the independent origin of a placenta that also includes close relatives that lack a placenta. We discuss possible adaptive advantages of the joint evolution of extensive placentation and superfetation in these fishes. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 99 , 784–796.     

SOME FEMALE COORDINATING FACTORS IN AMPHIBIAN FERTILIZATION

The influence of volume and ionic composition of the hydrating media upon the fertility of Bufo arenarum oocyte strings, has been studied with the following results: a) when immersed in equal volumes of ionic and non-ionic media, oocyte strings have been found to become more hydrated in the latter ones; b) oocytes are no longer fertile when hydration is 300–400% of their original weight ( critical hydration ). Fertility is recovered by adding ions or egg water to the medium or by modifying its pH; c) when hydration is beyond 500% of the original string weight ( extensive hydration ) fertility can also be recovered by these treatments, but only after a partial jelly-coat liquefaction by thioglycolate.
Egg water was also studied, and shown to have a buffering capacity between pH 5.5 and 7.0. It seems not to influence acrosomic proteinase release.     

Construction of a Normalized cDNA Library for the Trypanosoma cruzi Genome Project

Sequencing of the Trypanosoma cruzi genome is underway. Expressed sequence tags, obtained from cDNA libraries, facilitate mapping and gene discovery. The efficiency of large-scale generation of such tags is increased when using normalized cDNA libraries, where the frequency of individual clones is brought within a narrow range. Repetitive sequencing of abundant clones is therefore minimized. We constructed a normalized cDNA library from epimastigotes of clone CL Brener, and the efficiency of normalization of representative clones was assessed and shown to be adequate. The normalized cDNA library has been distributed to several groups and large-scale sequencing is currently in progress.     

Carpal evolution in diprotodontian marsupials

Carpal anatomy in adults of 13 outgroup species and 50 diprotodontian species from all families except Tarsipedidae was examined, as well as a histological sectional series of a pouch young Vombatus ursinus . The results are discussed in the light of recent phylogenies, and functional aspects were considered to gain an understanding of carpal evolution in this diverse marsupial clade. Mapping of eight carpal characters on alternative diprotodontian phylogenies results in trees of similar lengths. Of the eight characters investigated, five characterize major diprotodontian clades and one offers an additional autapomorphy for the order. The occurrence of a prepollex varies across Diprotodontia, and for some species is polymorphic. Petauroids, Cercartetus and Trichosurus share the presence of a lunatum, a well-developed proximal process of the capitatum, a deep ulno-triquetral joint and a deep palmar process of the hamatum. Most macropodids are distinguished by the lack of a lunatum, lack of a proximal process of the capitatum, a short palmar process of the hamatum, a pointed ulno-triquetral articulation and a variably occurring groove in the scaphoid. The macropodines are set apart from the potoroines by their loss of a lunatum and a short palmar process of the hamatum. Two terrestrial clades, vombatiforms and macropodids, differ from the arboreal possums in similar aspects, indicating that carpal diversity might be related to function.  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 146 , 369–384.     

Ecosystem engineering by leaf‐cutting ants: nests of Atta cephalotes drastically alter forest structure and microclimate

1. The role played by Atta species as ecosystem engineers remains poorly investigated despite previous evidence that their nests can impact plant assemblages. 2. In a large remnant of Atlantic forest, we compared forest structure at 36 Atta cephalotes nests to control sites and assessed shifts in microclimate along transects from nests up to 24 m into the forest (11 representative colonies). 3. Nests (average size: 55 m²) were virtually free of understorey vegetation with a high proportion of dead stems (up to 70%). 4. Canopy openness above colonies increased by roughly 40% compared with controls (5.3% at colony vs. 3.7% at control sites). 5. At nest centres, about 6% of the total radiation penetrated through the sparse canopy. Light levels declined exponentially, reaching a third (2%) in the unaffected forest understorey. 6. Likewise, maximum soil temperatures and daily amplitudes declined exponentially from 25 to 23 °C and 1.6 to 0.8 °C, respectively. Soil moisture increased significantly along transects, yet the effect was small and no differences were detected for air temperature and humidity. 7. We extrapolated that individual A. cephalotes nests modify the microclimate in an area of almost 200 m² on average. For the population, this amounts to 6% of the area along forest edges, where colonies are strongly aggregated, compared with only 0.6% in the forest interior. 8. Nests changed microclimate to an extent that has been reported to impact seed germination, plant growth, and survival of seedlings, conclusively demonstrating that leaf‐cutting ants act as ecosystem engineers.     

A novel wheat gene encoding a putative chitin-binding lectin is associated with resistance against Hessian fly

The gene-for-gene interaction triggering resistance of wheat against first-instar Hessian fly larvae utilizes specialized defence response genes not previously identified in other interactions with pests or pathogens. We characterized the expression of Hfr-3 , a novel gene encoding a lectin-like protein with 68–70% identity to the wheat germ agglutinins. Within each of the four predicted chitin-binding hevein domains, the HFR-3 translated protein sequence contained five conserved saccharide-binding amino acids. Quantification of Hfr-3 mRNA levels confirmed a rapid response and gradual increase, up to 3000-fold above the uninfested control in the incompatible interaction 3 days after egg hatch. Hfr-3 mRNA abundance was influenced by the number of larvae per plant, suggesting that resistance is localized rather than systemic. In addition, Hfr-3 was responsive to another sucking insect, the bird cherry-oat aphid, but not to fall armyworm attack, wounding or exogenous application of methyl jasmonate, salicylic acid or abscisic acid. Western blot analysis demonstrated that HFR-3 protein increased in parallel to mRNA levels in crown tissues during incompatible interactions. HFR-3 protein was detected in both virulent and avirulent larvae, indicating ingestion. Anti-nutritional proteins, such as lectins, may be responsible for the apparent starvation of avirulent first-instar Hessian fly larvae during the initial few days of incompatible interactions with resistant wheat plants.     

Cryptostomid Bryozoans From The Sassito Formation,Upper Ordovician Cool‐Water Carbonates of the Argentinean Precordillera

Abstract: Two new bryozoan species are described from the Upper Ordovician Sassito Formation of the Argentinean Precordillera: Moyerella  spinata sp. nov. and Phylloporina  sassitoensis sp. nov. The bryozoans are found in cool‐water carbonates. The Silurian genus Moyerella is reported the first time in the Ordovician, showing palaeobiogeographic connections with Estonia and Siberia.